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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820254.1_cds_XP_016500320.1_14160
CDS Infomation

[gene=LOC107818784] [db_xref=GeneID:107818784] [protein=DNA (cytosine-5)-methyltransferase CMT2-like] [protein_id=XP_016500320.1] [location=join(10633..10653,10713..10781,10900..10989,11384..11418,11537..11639,12373..12566,14212..14278,14379..14708,15643..15711,15830..15919,16019..16106,18078..18199,18270..18371,18490..18533,18633..18702,19419..19522,20080..20248)] [gbkey=CDS]
Sequence

ATGTTGATATACTGGGCCATAAAATTGCCCCCATTTCCACTTCCTTCGCATGACGTGATT
GTTAAATATTGCCCCTCACCTGAATTTGAGCGGAATACTGTTGCTTATGATGAAGGACAA
CCACACGGTGACCTTGAGGAAGCCCTTGTTCTTTGTGATGCTATATCTGATCTTCCAGCT
GGTCGAAAAACGAAGCGTCAAGGCTGGAAATTAAACGCTGGTGAAGAAGATGAAATCATA
TTCAATGTGGAATGCCATTATGCTCAAGCTAAGGTTGCTGGTTTCACTTTCAATATCGGA
GATTGTGCATATGTGAAGCTTGAATCATCAAGCACCAAAGGGTGGGTAGAGAATCATGAG
GTCTCTAGTTCAAACTCCAGTGAAAACAAAAACACTCGATTATCTCTTCCAATATGGCTA
AGCCTTGGTGGACATGGTTACCCGGTACCTGTAATGGTGGGAGGTAGCAAGTACCTGCGC
GAATTAGTCGAGGTTCATGCAAGCTGGCTGGGAAATTGCCAAGACAGCATAAAAGAATTT
GTTAGAAGGGGGAAACAATTGAAAATTTTGCCTCTACCAGGTGATATTGATATGATATGT
GGGGGTCCTCCTTGCCAGGGCATTAGTGGATACAATCGCCACAGAAATGTTGACGACCCA
TTGTCTGATGAGAAAAACCGTCAAATTATTATTTTTATGGATGTCGTGGAATTCTTACGG
CCTAAATATGTGTTGATGGAAAATGTGGCTGACATATTGAGGTTTGATAAAGCATCTCTT
GGAAGATATGCTTTAAGTCGTTTGGTACATATGAGATACCAAGCAAGATTGGGAACTATG
GCAGCTGGTTGTTATGGTCTCCCACAATTTCGATTGCGAGTGTTCTTTTGGGGTGCACTT
CCGAGTGAGAAATTGCCCCCATTTCCACTTCCTTCGCATGACATGATTGTTAAATATTGG
CCCTCACCTGAATTTGAGCGGAATACTGTTGCTTATGATGAAGGACAACCACGCGGTGAC
CTTGAGGAAGCCCTTGTTCTTCGTGATGCTATATCTGATCTTCCAGCTGTTACATGGCAT
GAAACTCGTGAAGAAATGCCATATGAGATGCCCGCGGAATCGGAGTTCCAGAAATACATA
AGATTACCTAAACATGAGATAGTGGGGTGTTCATCAACTAGAGATACGGAAACCAAAGAT
CCTGTTTTGTCTGATCATCGGCCTTGCCAATTAGCAGAAGACGATTACTTACGAGTTTGT
CTCGTCCCACATAAAAAGGGAGAAAACTTCAGGGACCTCCCTGGTGTAATTGTGGGAAAG
GATAATGTGGCTCGTCGTGATACAGAAGATCCAAAGGTGCTACCAAATGGAAAGCCCATG
GTTCCTGATTGTGCCTTCAATTTTGAACATGGAAAATCTAAAAGGCCATATGCAAGATTG
TGGTGGGATGAAACAATAGCTACTTTAGTGACGTTTCCTAATCATCGTGCCCATGCGGTC
TTACACCCAGAGCAGGATCGTGTTCTTACTATACGAGAGTATGCAAGATTGCAAGGTTTT
CCAGATTTCTATAGGTTTTCTGGCACTCCCAAGGAAAGATATTGCCAAGTTGGGAATGCT
GTAGCAGTTCCTGTTGGGCGAGCGCTCGGGTATGCACTTGGACTTGCCTTCCAGAGGCTA
ACTGGAAATGAGCCTCTTATTAAATTGCCACCAAATTTCTCATTCTTAAAGCCTCCAATT
GATGACATTGTTGTCTTGCAAAATTGA

Peptide Sequence

PEP ID

XP_016500320.1
PEP Infomation

PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Nicotiana tabacum]
Sequence

MLIYWAIKLPPFPLPSHDVIVKYCPSPEFERNTVAYDEGQPHGDLEEALVLCDAISDLPA
GRKTKRQGWKLNAGEEDEIIFNVECHYAQAKVAGFTFNIGDCAYVKLESSSTKGWVENHE
VSSSNSSENKNTRLSLPIWLSLGGHGYPVPVMVGGSKYLRELVEVHASWLGNCQDSIKEF
VRRGKQLKILPLPGDIDMICGGPPCQGISGYNRHRNVDDPLSDEKNRQIIIFMDVVEFLR
PKYVLMENVADILRFDKASLGRYALSRLVHMRYQARLGTMAAGCYGLPQFRLRVFFWGAL
PSEKLPPFPLPSHDMIVKYWPSPEFERNTVAYDEGQPRGDLEEALVLRDAISDLPAVTWH
ETREEMPYEMPAESEFQKYIRLPKHEIVGCSSTRDTETKDPVLSDHRPCQLAEDDYLRVC
LVPHKKGENFRDLPGVIVGKDNVARRDTEDPKVLPNGKPMVPDCAFNFEHGKSKRPYARL
WWDETIATLVTFPNHRAHAVLHPEQDRVLTIREYARLQGFPDFYRFSGTPKERYCQVGNA
VAVPVGRALGYALGLAFQRLTGNEPLIKLPPNFSFLKPPIDDIVVLQN

Transcript Sequence

Gene sequence data has not been registered.